1. Biostrings::HNF4alpha
    Known HNF4alpha binding sequences
    DNAStringSet
  2. Biostrings::yeastSEQCHR1
    An annotation data file for CHR1 in the yeastSEQ package
  3. pwalign::BLOSUM100
    Predefined scoring matrices
    matrix|24 x 24
  4. pwalign::BLOSUM45
    Predefined scoring matrices
    matrix|25 x 25
  5. pwalign::BLOSUM50
    Predefined scoring matrices
    matrix|24 x 24
  6. pwalign::BLOSUM62
    Predefined scoring matrices
    matrix|25 x 25
  7. pwalign::BLOSUM80
    Predefined scoring matrices
    matrix|25 x 25
  8. pwalign::PAM120
    Predefined scoring matrices
    matrix|24 x 24
  9. pwalign::PAM250
    Predefined scoring matrices
    matrix|24 x 24
  10. pwalign::PAM30
    Predefined scoring matrices
    matrix|25 x 25
  11. pwalign::PAM40
    Predefined scoring matrices
    matrix|24 x 24
  12. pwalign::PAM70
    Predefined scoring matrices
    matrix|25 x 25
  13. pwalign::phiX174Phage
    Versions of bacteriophage phiX174 complete genome and sample short reads
    DNAStringSet
  14. pwalign::quPhiX174
    Versions of bacteriophage phiX174 complete genome and sample short reads
    BStringSet
  15. pwalign::srPhiX174
    Versions of bacteriophage phiX174 complete genome and sample short reads
    DNAStringSet
  16. pwalign::wtPhiX174
    Versions of bacteriophage phiX174 complete genome and sample short reads